TSS: Rfhg 105208.1: Difference between revisions

Revision as of 18:32, 6 November 2024

Basic information about the TSS

TSS ID:	rfhg_105208.1
Species:	human
Chr:	chr8

Start:	28339393
End:	28339402
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D4076033,EH38E2620282)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	PNOC
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	750
Nearest PromoterID:	NM_001284244
Entrez ID:	5368
Nearest Unigene:	Hs.88218
Nearest Refseq:	NM_006228
Nearest Ensembl:	ENSG00000168081
Gene Name:	PNOC
Gene Alias:	N/OFQ\|NOP\|OFQ\|PPNOC\|ppN/OFQ
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.600000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=exon (NM_006228, exon 3 of 4)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001284244
 |nearest_refseq=NM_006228
+|nearest_transcripts=
 |nearest_unigene=Hs.88218
 |peak_score=1