TSS: Rfhg 114673.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENST00000354479.5:0 ENST00000421362.6:0 NM_001040411.3:0 NM_001040412.3:0 ENST00000534880.1:47 ENST00000537671.1:55 | |||
|annotation=promoter-TSS (NM_001040411) | |annotation=promoter-TSS (NM_001040411) | ||
|ccre_category=N | |ccre_category=N | ||
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|nearest_promoter_id=NM_001040411 | |nearest_promoter_id=NM_001040411 | ||
|nearest_refseq=NM_203299 | |nearest_refseq=NM_203299 | ||
|nearest_transcripts=ENST00000534880.1:47 ENST00000537671.1:55 | |||
|nearest_unigene=Hs.148250 | |nearest_unigene=Hs.148250 | ||
|peak_score=1 | |peak_score=1 | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000354479.5 ENST00000421362.6 | |transcript_name=ENST00000354479.5 ENST00000421362.6 NM_001040411.3 NM_001040412.3 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_114673.1 | |tss_id=rfhg_114673.1 |
Revision as of 01:19, 7 November 2024
Basic information about the TSS
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Source datasets | EPD | |||||||||||||
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Protocol | TSS_database | |||||||||||||
TSS cluster detected* | 1 |
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
Description: | - |
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Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 0 |
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Nearest PromoterID: | NM_001040411 |
Entrez ID: | 138724 |
Nearest Unigene: | Hs.148250 |
Nearest Refseq: | NM_203299 |
Nearest Ensembl: | ENSG00000174038 |
Gene Name: | C9orf131 |
Gene Alias: | - |
Gene Type: | protein-coding |
CpG%: | 0.000000 |
GC%: | 0.000000 |
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.