TSS: Rfhg 1150.1: Difference between revisions

Revision as of 01:32, 7 November 2024

Basic information about the TSS

TSS ID:	rfhg_1150.1
Species:	human
Chr:	chr1

Start:	8520750
End:	8520754
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D2123723,EH38E1316201)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	SNORD128
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-25839
Nearest PromoterID:	NR_132752
Entrez ID:	106632271
Nearest Unigene:
Nearest Refseq:	NR_132752
Nearest Ensembl:
Gene Name:	SNORD128
Gene Alias:	ZL43
Gene Type:	snoRNA
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NM_001042681, intron 7 of 22)
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_132752
 |nearest_refseq=NR_132752
+|nearest_transcripts=
 |nearest_unigene=
 |peak_score=1