TSS: Hg 102259.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.01 |distance_to_tss=-51220 |entrez_id=23245 |gc_percent=0.368159 |gene_alias=bA67K19.1 |gene_description=astrotactin 2 |gene_name=ASTN2 |gene_type=p...") |
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{{TSSDetail | {{TSSDetail | ||
|all_trans=ENST00000436524.1:0 uc064vhs.1:0 | |||
|chr=chr9 | |||
|cpg_percent=0.01 | |cpg_percent=0.01 | ||
|distance=0 | |||
|distance_to_tss=-51220 | |distance_to_tss=-51220 | ||
|end=117466261 | |||
|entrez_id=23245 | |entrez_id=23245 | ||
|gc_percent=0.368159 | |gc_percent=0.368159 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_014010 | |nearest_refseq=NM_014010 | ||
|nearest_unigene=Hs.601562 | |nearest_unigene=Hs.601562 | ||
|num_trans=2 | |||
|species=human | |||
|start=117466257 | |||
|strand=- | |||
|transcript_name=ENST00000436524.1 uc064vhs.1 | |||
|tss_classification=no | |||
|tss_id=hg_102259.1 | |tss_id=hg_102259.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:18, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -51220 |
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| Nearest PromoterID: | NM_014010 |
| Entrez ID: | 23245 |
| Nearest Unigene: | Hs.601562 |
| Nearest Refseq: | NM_014010 |
| Nearest Ensembl: | ENSG00000148219 |
| Gene Name: | ASTN2 |
| Gene Alias: | bA67K19.1 |
| Gene Description: | astrotactin 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.01 |
| GC%: | 0.368159 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |