TSS: Hg 102267.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=636707 |entrez_id=1620 |gc_percent=0.41791 |gene_alias=DBC1|DBCCR1|FAM5A |gene_description=BMP/retinoic acid inducible neural speci...") |
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{{TSSDetail | {{TSSDetail | ||
|DBCCR1= | |||
|FAM5A= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=636707 | |distance_to_tss=636707 | ||
|end=118732772 | |||
|entrez_id=1620 | |entrez_id=1620 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_014618 | |nearest_refseq=NM_014618 | ||
|nearest_unigene=Hs.532316 | |nearest_unigene=Hs.532316 | ||
|num_trans=0 | |||
|species=human | |||
|start=118732736 | |||
|strand=- | |||
|tata_box="-61(CACTTTATGAGG,-,0.00)" | |tata_box="-61(CACTTTATGAGG,-,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102267.1 | |tss_id=hg_102267.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:19, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 636707 |
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| Nearest PromoterID: | NM_014618 |
| Entrez ID: | 1620 |
| Nearest Unigene: | Hs.532316 |
| Nearest Refseq: | NM_014618 |
| Nearest Ensembl: | ENSG00000078725 |
| Gene Name: | BRINP1 |
| Gene Alias: | DBC1 |
| Gene Description: | BMP/retinoic acid inducible neural specific 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-61(CACTTTATGAGG,-,0.00)" |