TSS: Rfhg 127316.1: Difference between revisions

Revision as of 10:10, 7 November 2024

Basic information about the TSS

TSS ID:	rfhg_127316.1
Species:	human
Chr:	chr10

Start:	78974560
End:	78974589
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS,CTCF-bound (EH38D2365398,EH38E1482203)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	ZMIZ1-AS1
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	92874
Nearest PromoterID:	NR_024429
Entrez ID:	283050
Nearest Unigene:	Hs.309176
Nearest Refseq:	NR_015429
Nearest Ensembl:	ENSG00000224596
Gene Name:	ZMIZ1-AS1
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.433333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NR_015429, intron 3 of 7)
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_024429
 |nearest_refseq=NR_015429
+|nearest_transcripts=
 |nearest_unigene=Hs.309176
 |peak_score=1