TSS: Hg 102648.1: Difference between revisions
From referenceTSS
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|distance_to_tss=40903 | |distance_to_tss=40903 | ||
|end=128026422 | |end=128026422 | ||
|end_of_center_position=128026418 | |||
|entrez_id=203245 | |entrez_id=203245 | ||
|gc_percent=0.547264 | |gc_percent=0.547264 | ||
|gene_alias=C9orf90 | |gene_alias=C9orf90 | ||
|gene_description=nuclear apoptosis inducing factor 1 | |gene_description=nuclear apoptosis inducing factor 1 | ||
|gene_name=NAIF1 | |gene_name=NAIF1 | ||
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|species=human | |species=human | ||
|start=128026412 | |start=128026412 | ||
|start_of_center_position=128026417 | |||
|strand=- | |strand=- | ||
|tata_box="-81(GCCCCTTAAAGG,-,0.00),-80(CCCCTTAAAGGG,+,0.00),-80(CCCCTTAAAGGG,-,0.00),-79(CCCTTAAAGGGG,+,0.00),-78(CCTTAAAGGGGA,+,0.00)" | |tata_box="-81(GCCCCTTAAAGG,-,0.00),-80(CCCCTTAAAGGG,+,0.00),-80(CCCCTTAAAGGG,-,0.00),-79(CCCTTAAAGGGG,+,0.00),-78(CCTTAAAGGGGA,+,0.00)" |
Revision as of 13:29, 11 May 2019
Basic information about the TSS
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TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
Distance to TSS: | 40903 |
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Nearest PromoterID: | NM_197956 |
Entrez ID: | 203245 |
Nearest Unigene: | Hs.373606 |
Nearest Refseq: | NM_197956 |
Nearest Ensembl: | ENSG00000171169 |
Gene Name: | NAIF1 |
Gene Alias: | C9orf90 |
Gene Description: | nuclear apoptosis inducing factor 1 |
Gene Type: | protein-coding |
CpG%: | 0.03 |
GC%: | 0.547264 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-81(GCCCCTTAAAGG,-,0.00),-80(CCCCTTAAAGGG,+,0.00),-80(CCCCTTAAAGGG,-,0.00),-79(CCCTTAAAGGGG,+,0.00),-78(CCTTAAAGGGGA,+,0.00)" |