TSS: Rfhg 132912.1: Difference between revisions

Revision as of 14:29, 7 November 2024

Basic information about the TSS

TSS ID:	rfhg_132912.1
Species:	human
Chr:	chr11

Start:	1928602
End:	1928607
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D2414615,EH38E1515020)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	TNNT3
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	5773
Nearest PromoterID:	NM_001367842
Entrez ID:	7140
Nearest Unigene:	Hs.73454
Nearest Refseq:	NM_006757
Nearest Ensembl:	ENSG00000130595
Gene Name:	TNNT3
Gene Alias:	DA2B2\|TNTF\|beta-TnTF
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NM_001367847, intron 7 of 15)
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001367842
 |nearest_refseq=NM_006757
+|nearest_transcripts=
 |nearest_unigene=Hs.73454
 |peak_score=1