TSS: Rfhg 141782.1: Difference between revisions

Revision as of 22:08, 7 November 2024

Basic information about the TSS

TSS ID:	rfhg_141782.1
Species:	human
Chr:	chr11

Start:	85627293
End:	85627308
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000650630.1:23 CR749820:23
GeneID:	1740
HGNC/MGI_ID:	HGNC:2901 HGNC:7220
UniProt_ID:	A0A3B3ITF1
Nearer transcript ids and distances:	ENST00000376104.7:-36 NM_001142699.3:-36 ENST00000526147.1:-441 view more...

Gene_name:	DLG2
Gene_symbol:	DLG2 MPP2
Gene_synonyms:	DKFZp761D0712 PPP1R58 PSD-93 PSD93 chapsyn-110
Gene_source:	HGNC:2901 HGNC:7220

TATA-Box annotation

Distance to TSS:	-30
Nearest PromoterID:	NM_001142699
Entrez ID:	1740
Nearest Unigene:	Hs.367656
Nearest Refseq:	NM_001364
Nearest Ensembl:	ENSG00000150672
Gene Name:	DLG2
Gene Alias:	PPP1R58\|PSD-93\|PSD93\|chapsyn-110
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000650630.1:23 CR749820:23 ENST00000376104.7:-36 NM_001142699.3:-36 ENST00000526147.1:-441
 |annotation=promoter-TSS (NM_001142699)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001142699
 |nearest_refseq=NM_001364
+|nearest_transcripts=ENST00000376104.7:-36 NM_001142699.3:-36 ENST00000526147.1:-441
 |nearest_unigene=Hs.367656
 |peak_score=1