TSS: Rfhg 143746.1: Difference between revisions

Revision as of 23:48, 7 November 2024

Basic information about the TSS

TSS ID:	rfhg_143746.1
Species:	human
Chr:	chr11

Start:	117986697
End:	117986706
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D2503021,EH38E1573795)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	IL10RA
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	307
Nearest PromoterID:	NR_026691
Entrez ID:	3587
Nearest Unigene:	Hs.504035
Nearest Refseq:	NM_001558
Nearest Ensembl:	ENSG00000110324
Gene Name:	IL10RA
Gene Alias:	CD210\|CD210a\|CDW210A\|HIL-10R\|IL-10R1\|IL10R
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=non-coding (NR_026691, exon 2 of 8)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_026691
 |nearest_refseq=NM_001558
+|nearest_transcripts=
 |nearest_unigene=Hs.504035
 |peak_score=1