TSS: Hg 102857.1: Difference between revisions
From referenceTSS
No edit summary |
No edit summary |
||
Line 6: | Line 6: | ||
|distance_to_tss=53464 | |distance_to_tss=53464 | ||
|end=131656385 | |end=131656385 | ||
|end_of_center_position=131656378 | |||
|entrez_id=2889 | |entrez_id=2889 | ||
|gc_percent=0.497512 | |gc_percent=0.497512 | ||
|gene_alias=C3G | |gene_alias=C3G | ||
|gene_description=Rap guanine nucleotide exchange factor 1 | |gene_description=Rap guanine nucleotide exchange factor 1 | ||
|gene_name=RAPGEF1 | |gene_name=RAPGEF1 | ||
Line 19: | Line 20: | ||
|species=human | |species=human | ||
|start=131656370 | |start=131656370 | ||
|start_of_center_position=131656377 | |||
|strand=- | |strand=- | ||
|tata_box="-29(TCTTTTAGGGAC,+,0.00)" | |tata_box="-29(TCTTTTAGGGAC,+,0.00)" |
Revision as of 14:29, 11 May 2019
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 53464 |
---|---|
Nearest PromoterID: | NM_198679 |
Entrez ID: | 2889 |
Nearest Unigene: | Hs.127897 |
Nearest Refseq: | NM_005312 |
Nearest Ensembl: | ENSG00000107263 |
Gene Name: | RAPGEF1 |
Gene Alias: | C3G |
Gene Description: | Rap guanine nucleotide exchange factor 1 |
Gene Type: | protein-coding |
CpG%: | 0.005 |
GC%: | 0.497512 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-29(TCTTTTAGGGAC,+,0.00)" |