TSS: Rfhg 157634.1: Difference between revisions

Revision as of 11:34, 8 November 2024

Basic information about the TSS

TSS ID:	rfhg_157634.1
Species:	human
Chr:	chr12

Start:	122721159
End:	122721200
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	dELS (EH38D2617648,EH38E1651774)
Category:	dELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	HCAR3
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-4368
Nearest PromoterID:	NM_006018
Entrez ID:	8843
Nearest Unigene:	Hs.458425
Nearest Refseq:	NM_006018
Nearest Ensembl:	ENSG00000255398
Gene Name:	HCAR3
Gene Alias:	GPR109B\|HCA3\|HM74\|PUMAG\|Puma-g
Gene Type:	protein-coding
CpG%:	0.073171
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=Intergenic
 |ccre_category=dELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_006018
 |nearest_refseq=NM_006018
+|nearest_transcripts=
 |nearest_unigene=Hs.458425
 |peak_score=1