TSS: Rfhg 165088.1: Difference between revisions

Revision as of 13:53, 8 November 2024

Basic information about the TSS

TSS ID:	rfhg_165088.1
Species:	human
Chr:	chr14

Start:	35046113
End:	35046165
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2708395,EH38E1708292)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	FAM177A1
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-105
Nearest PromoterID:	NM_173607
Entrez ID:	283635
Nearest Unigene:	Hs.446357
Nearest Refseq:	NM_173607
Nearest Ensembl:	ENSG00000151327
Gene Name:	FAM177A1
Gene Alias:	C14orf24
Gene Type:	protein-coding
CpG%:	0.096154
GC%:	0.603774
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=promoter-TSS (NM_001289022)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_173607
 |nearest_refseq=NM_173607
+|nearest_transcripts=
 |nearest_unigene=Hs.446357
 |peak_score=1