TSS: Rfhg 173784.1: Difference between revisions

Revision as of 11:13, 11 November 2024

Basic information about the TSS

TSS ID:	rfhg_173784.1
Species:	human
Chr:	chr15

Start:	49424365
End:	49424382
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D2786798,EH38E1760815)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	HF548201:9
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	KJ901427:-67 AB590830:-67 CR542002:-67 view more...

Gene_name:	FGF7
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	1131
Nearest PromoterID:	NM_002009
Entrez ID:	2252
Nearest Unigene:	Hs.567268
Nearest Refseq:	NM_002009
Nearest Ensembl:	ENSG00000140285
Gene Name:	FGF7
Gene Alias:	HBGF-7\|KGF
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.388889
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=HF548201:9 KJ901427:-67 AB590830:-67 CR542002:-67
 |annotation=exon (NM_002009, exon 2 of 4)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_002009
 |nearest_refseq=NM_002009
+|nearest_transcripts=KJ901427:-67 AB590830:-67 CR542002:-67
 |nearest_unigene=Hs.567268
 |peak_score=1