TSS: Rfhg 175381.1: Difference between revisions

Revision as of 11:41, 11 November 2024

Basic information about the TSS

TSS ID:	rfhg_175381.1
Species:	human
Chr:	chr15

Start:	65076745
End:	65076767
Strand:	+

Source datasets

FANTOM5|EPD

Protocol

CAGE|TSS_database

TSS cluster detected^*

2

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2800146,EH38E1770449)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000432196.5:0 NM_001101362.3:0
GeneID:	390594
HGNC/MGI_ID:	HGNC:37227
UniProt_ID:	C9JR72
Nearer transcript ids and distances:	LF383570:20 MA619147:20 LF208543:48 MA444120:48 view more...

Gene_name:	KBTBD13
Gene_symbol:	KBTBD13
Gene_synonyms:	NEM6 hCG_1645727
Gene_source:	HGNC:37227

TATA-Box annotation

Distance to TSS:	-60
Nearest PromoterID:	NM_001101362
Entrez ID:	390594
Nearest Unigene:	Hs.586890
Nearest Refseq:	NM_001101362
Nearest Ensembl:	ENSG00000234438
Gene Name:	KBTBD13
Gene Alias:	HCG1645727\|NEM6
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.695652
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000432196.5:0 NM_001101362.3:0 LF383570:20 MA619147:20 LF208543:48 MA444120:48
 |annotation=promoter-TSS (NM_001101362)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001101362
 |nearest_refseq=NM_001101362
+|nearest_transcripts=LF383570:20 MA619147:20 LF208543:48 MA444120:48
 |nearest_unigene=Hs.586890
 |peak_score=1
@@ Line 33: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000432196.5
+|transcript_name=ENST00000432196.5 NM_001101362.3
 |tss_cluster_detected=2
 |tss_id=rfhg_175381.1