TSS: Hg 10232.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.065 |distance_to_tss=-42953 |entrez_id=101929074 |gc_percent=0.646766 |gene_alias=- |gene_description=PIK3CD antisense RNA 2 |gene_name=PIK3CD-AS2 |...") |
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{{TSSDetail | {{TSSDetail | ||
|chr=chr1 | |||
|cpg_percent=0.065 | |cpg_percent=0.065 | ||
|distance= | |||
|distance_to_tss=-42953 | |distance_to_tss=-42953 | ||
|end=9730533 | |||
|entrez_id=101929074 | |entrez_id=101929074 | ||
|gc_percent=0.646766 | |gc_percent=0.646766 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NR_126366 | |nearest_refseq=NR_126366 | ||
|nearest_unigene=Hs.661762 | |nearest_unigene=Hs.661762 | ||
|num_trans=0 | |||
|species=human | |||
|start=9730521 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_10232.1 | |tss_id=hg_10232.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:21, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -42953 |
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| Nearest PromoterID: | NR_126368 |
| Entrez ID: | 101929074 |
| Nearest Unigene: | Hs.661762 |
| Nearest Refseq: | NR_126366 |
| Nearest Ensembl: | ENSG00000231789 |
| Gene Name: | PIK3CD-AS2 |
| Gene Alias: | - |
| Gene Description: | PIK3CD antisense RNA 2 |
| Gene Type: | ncRNA |
| CpG%: | 0.065 |
| GC%: | 0.646766 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |