TSS: Rfhg 184024.1: Difference between revisions

Revision as of 14:20, 11 November 2024

Basic information about the TSS

TSS ID:	rfhg_184024.1
Species:	human
Chr:	chr16

Start:	49857118
End:	49857136
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D2863081,EH38E1814446)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	ZNF423
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	792
Nearest PromoterID:	NM_001271620
Entrez ID:	23090
Nearest Unigene:	Hs.443715
Nearest Refseq:	NM_015069
Nearest Ensembl:	ENSG00000102935
Gene Name:	ZNF423
Gene Alias:	Ebfaz\|JBTS19\|NPHP14\|OAZ\|Roaz\|ZFP423\|Zfp104\|hOAZ
Gene Type:	protein-coding
CpG%:	0.055556
GC%:	0.578947
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NM_001271620, intron 1 of 7)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001271620
 |nearest_refseq=NM_015069
+|nearest_transcripts=
 |nearest_unigene=Hs.443715
 |peak_score=1