TSS: Hg 102334.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0 |distance_to_tss=-6353 |entrez_id=7185 |gc_percent=0.621891 |gene_alias=EBI6|MGC:10353 |gene_description=TNF receptor associated factor 1 |gene_name...") |
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{{TSSDetail | {{TSSDetail | ||
|MGC:10353= | |||
|chr=chr9 | |||
|cpg_percent=0 | |cpg_percent=0 | ||
|distance= | |||
|distance_to_tss=-6353 | |distance_to_tss=-6353 | ||
|end=120935534 | |||
|entrez_id=7185 | |entrez_id=7185 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_005658 | |nearest_refseq=NM_005658 | ||
|nearest_unigene=Hs.531251 | |nearest_unigene=Hs.531251 | ||
|num_trans=0 | |||
|species=human | |||
|start=120935518 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102334.1 | |tss_id=hg_102334.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:22, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -6353 |
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| Nearest PromoterID: | NM_001190945 |
| Entrez ID: | 7185 |
| Nearest Unigene: | Hs.531251 |
| Nearest Refseq: | NM_005658 |
| Nearest Ensembl: | ENSG00000056558 |
| Gene Name: | TRAF1 |
| Gene Alias: | EBI6 |
| Gene Description: | TNF receptor associated factor 1 |
| Gene Type: | protein-coding |
| CpG%: | 0 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |