TSS: Rfhg 204866.1: Difference between revisions

Revision as of 20:48, 11 November 2024

Basic information about the TSS

TSS ID:	rfhg_204866.1
Species:	human
Chr:	chr18

Start:	80258842
End:	80258842
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	DNase-H3K4me3 (EH38D3030286,EH38E1929814)
Category:	DNase-H3K4me3

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	PARD6G
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-11328
Nearest PromoterID:	NM_032510
Entrez ID:	84552
Nearest Unigene:	Hs.654920
Nearest Refseq:	NM_032510
Nearest Ensembl:	ENSG00000178184
Gene Name:	PARD6G
Gene Alias:	PAR-6G\|PAR6gamma
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	1.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=Intergenic
 |ccre_category=DNase-H3K4me3
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_032510
 |nearest_refseq=NM_032510
+|nearest_transcripts=
 |nearest_unigene=Hs.654920
 |peak_score=1