TSS: Hg 102355.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=20776 |entrez_id=2681 |gc_percent=0.502488 |gene_alias=GGTA|GGTA1|GLYT2|a1/3GTP |gene_description="glycoprotein, alpha-galactos...") |
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{{TSSDetail | {{TSSDetail | ||
|GGTA1= | |||
|GLYT2= | |||
|a1/3GTP= | |||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |||
|distance_to_tss=20776 | |distance_to_tss=20776 | ||
|end=121479258 | |||
|entrez_id=2681 | |entrez_id=2681 | ||
|gc_percent=0.502488 | |gc_percent=0.502488 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NR_003191 | |nearest_refseq=NR_003191 | ||
|nearest_unigene=Hs.97469 | |nearest_unigene=Hs.97469 | ||
|num_trans=0 | |||
|species=human | |||
|start=121479244 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102355.1 | |tss_id=hg_102355.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:22, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 20776 |
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| Nearest PromoterID: | NR_045211 |
| Entrez ID: | 2681 |
| Nearest Unigene: | Hs.97469 |
| Nearest Refseq: | NR_003191 |
| Nearest Ensembl: | ENSG00000204136 |
| Gene Name: | GGTA1P |
| Gene Alias: | GGTA |
| Gene Description: | "glycoprotein, alpha-galactosyltransferase 1 pseudogene" |
| Gene Type: | pseudo |
| CpG%: | 0.025 |
| GC%: | 0.502488 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |