TSS: Rfhg 214809.1: Difference between revisions

Revision as of 23:54, 11 November 2024

Basic information about the TSS

TSS ID:	rfhg_214809.1
Species:	human
Chr:	chr19

Start:	49498024
End:	49498032
Strand:	+

Source datasets

PRJNA401781

Protocol

oligo_capping

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS (EH38D3070417,EH38E1960931)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NR_001285.1:-305
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	SNORD35B
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	309
Nearest PromoterID:	NR_001285
Entrez ID:	84546
Nearest Unigene:
Nearest Refseq:	NR_001285
Nearest Ensembl:	ENSG00000200530
Gene Name:	SNORD35B
Gene Alias:	RNU35B\|U35B
Gene Type:	snoRNA
CpG%:	0.000000
GC%:	0.555556
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=NR_001285.1:-305
 |annotation=TTS (NR_001285)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_001285
 |nearest_refseq=NR_001285
+|nearest_transcripts=
 |nearest_unigene=
 |peak_score=1