TSS: Rfhg 226076.1: Difference between revisions

Revision as of 03:09, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_226076.1
Species:	human
Chr:	chr21

Start:	38274478
End:	38274491
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D3341092,EH38E2141546)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:

Gene_name:	KCNJ15
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	2064
Nearest PromoterID:	NM_170737
Entrez ID:	3772
Nearest Unigene:	Hs.411299
Nearest Refseq:	NM_002243
Nearest Ensembl:	ENSG00000157551
Gene Name:	KCNJ15
Gene Alias:	IRKK\|KIR1.3\|KIR4.2
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=
 |annotation=intron (NM_170737, intron 1 of 2)
 |ccre_category=pELS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_170737
 |nearest_refseq=NM_002243
+|nearest_transcripts=
 |nearest_unigene=Hs.411299
 |peak_score=1