TSS: Hg 102377.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=93920 |entrez_id=158135 |gc_percent=0.457711 |gene_alias=C9orf20|bA244O19.1 |gene_description=tubulin tyrosine ligase like 11 |...") |
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{{TSSDetail | {{TSSDetail | ||
|bA244O19.1= | |||
|chr=chr9 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance= | |||
|distance_to_tss=93920 | |distance_to_tss=93920 | ||
|end=121999698 | |||
|entrez_id=158135 | |entrez_id=158135 | ||
|gc_percent=0.457711 | |gc_percent=0.457711 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_194252 | |nearest_refseq=NM_194252 | ||
|nearest_unigene=Hs.438937 | |nearest_unigene=Hs.438937 | ||
|num_trans=0 | |||
|species=human | |||
|start=121999674 | |||
|strand=- | |||
|tata_box="4(CCTTTAATGCCT,+,0.00)" | |tata_box="4(CCTTTAATGCCT,+,0.00)" | ||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102377.1 | |tss_id=hg_102377.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:23, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 93920 |
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| Nearest PromoterID: | NM_001139442 |
| Entrez ID: | 158135 |
| Nearest Unigene: | Hs.438937 |
| Nearest Refseq: | NM_194252 |
| Nearest Ensembl: | ENSG00000175764 |
| Gene Name: | TTLL11 |
| Gene Alias: | C9orf20 |
| Gene Description: | tubulin tyrosine ligase like 11 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.457711 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "4(CCTTTAATGCCT,+,0.00)" |