TSS: Rfhg 48713.1: Difference between revisions

Revision as of 15:02, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_48713.1
Species:	human
Chr:	chr3

Start:	113403962
End:	113403972
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000669165.1:16
GeneID:	100874029
HGNC/MGI_ID:	HGNC:41113
UniProt_ID:
Nearer transcript ids and distances:	ENST00000473329.1:19 ENST00000498480.1:26 NR_046728.1:26 view more...

Gene_name:	CFAP44-AS1
Gene_symbol:	CFAP44-AS1
Gene_synonyms:
Gene_source:	HGNC:41113

TATA-Box annotation

Distance to TSS:	-31
Nearest PromoterID:	NR_046728
Entrez ID:	100874029
Nearest Unigene:	Hs.599665
Nearest Refseq:	NR_046728
Nearest Ensembl:	ENSG00000243849
Gene Name:	CFAP44-AS1
Gene Alias:	WDR52-AS1
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.454545
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000669165.1:16 ENST00000473329.1:19 ENST00000498480.1:26 NR_046728.1:26
 |annotation=promoter-TSS (NR_046728)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_046728
 |nearest_refseq=NR_046728
+|nearest_transcripts=ENST00000473329.1:19 ENST00000498480.1:26 NR_046728.1:26
 |nearest_unigene=Hs.599665
 |peak_score=1