TSS: Hg 102412.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.025 |distance_to_tss=-16114 |entrez_id=286204 |gc_percent=0.527363 |gene_alias=FSGS9|VMCKD |gene_description="crumbs 2, cell polarity complex compon...") |
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{{TSSDetail | {{TSSDetail | ||
|VMCKD= | |||
|chr=chr9 | |||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
|distance= | |||
|distance_to_tss=-16114 | |distance_to_tss=-16114 | ||
|end=123340062 | |||
|entrez_id=286204 | |entrez_id=286204 | ||
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| Line 12: | Line 16: | ||
|nearest_refseq=NM_173689 | |nearest_refseq=NM_173689 | ||
|nearest_unigene=Hs.568340 | |nearest_unigene=Hs.568340 | ||
|num_trans=0 | |||
|species=human | |||
|start=123340044 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102412.1 | |tss_id=hg_102412.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:25, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -16114 |
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| Nearest PromoterID: | NM_173689 |
| Entrez ID: | 286204 |
| Nearest Unigene: | Hs.568340 |
| Nearest Refseq: | NM_173689 |
| Nearest Ensembl: | ENSG00000148204 |
| Gene Name: | CRB2 |
| Gene Alias: | FSGS9 |
| Gene Description: | "crumbs 2, cell polarity complex component" |
| Gene Type: | protein-coding |
| CpG%: | 0.025 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |