TSS: Rfhg 58302.1: Difference between revisions

Revision as of 18:01, 12 November 2024

Basic information about the TSS

TSS ID:	rfhg_58302.1
Species:	human
Chr:	chr4

Start:	69961124
End:	69961124
Strand:	-

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	X17070:116 BC096194:116 BC096196:116 BC096197:116 BC069554:116 BC096195:116
GeneID:	1447
HGNC/MGI_ID:	HGNC:2447
UniProt_ID:
Nearer transcript ids and distances:	ENST00000353151.3:117 KJ890983:127 X55739:129 KF751868:129 view more...

Gene_name:	CSN2
Gene_symbol:	CSN2
Gene_synonyms:
Gene_source:	HGNC:2447

TATA-Box annotation

Distance to TSS:	-113
Nearest PromoterID:	NM_001891
Entrez ID:	1447
Nearest Unigene:	Hs.2242
Nearest Refseq:	NM_001891
Nearest Ensembl:	ENSG00000135222
Gene Name:	CSN2
Gene Alias:	CASB
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=X17070:116 BC096194:116 BC096196:116 BC096197:116 BC069554:116 BC096195:116 ENST00000353151.3:117 KJ890983:127 X55739:129 KF751868:129
 |annotation=promoter-TSS (NM_001302770)
 |ccre_category=N
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_001891
 |nearest_refseq=NM_001891
+|nearest_transcripts=ENST00000353151.3:117 KJ890983:127 X55739:129 KF751868:129
 |nearest_unigene=Hs.2242
 |peak_score=1