TSS: Rfhg 91971.1: Difference between revisions

Revision as of 04:25, 13 November 2024

Basic information about the TSS

TSS ID:	rfhg_91971.1
Species:	human
Chr:	chr7

Start:	20217755
End:	20217778
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D3951807,EH38E2538323)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000430859.1:-169
GeneID:	100506098
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000439058.5:-178 NR_134569.1:-178 NR_134568.1:-178 NR_134567.1:-178 view more...

Gene_name:	LOC100506098
Gene_symbol:	MACC1-DT
Gene_synonyms:
Gene_source:	EntrezGene:100506098

TATA-Box annotation

Distance to TSS:	189
Nearest PromoterID:	NR_134569
Entrez ID:	100506098
Nearest Unigene:	Hs.59203
Nearest Refseq:	NR_134567
Nearest Ensembl:	ENSG00000233834
Gene Name:	LOC100506098
Gene Alias:	-
Gene Type:	ncRNA
CpG%:	0.000000
GC%:	0.458333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=ENST00000430859.1:-169 ENST00000439058.5:-178 NR_134569.1:-178 NR_134568.1:-178 NR_134567.1:-178
 |annotation=promoter-TSS (NM_182762)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NR_134569
 |nearest_refseq=NR_134567
+|nearest_transcripts=ENST00000439058.5:-178 NR_134569.1:-178 NR_134568.1:-178 NR_134567.1:-178
 |nearest_unigene=Hs.59203
 |peak_score=1