TSS: Rfhg 98016.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENST00000262940.12:0 ENST00000449970.6:0 ENST00000523568.5:0 ENST00000521892.1:0 NM_006989.6:0 NM_001079877.2:-1 ENST00000522443.5:5 ENST00000522801.5:13 ENST00000462172.5:22 ENST00000521076.5:59 | |||
|annotation=promoter-TSS (NM_006989) | |annotation=promoter-TSS (NM_006989) | ||
|ccre_category=N | |ccre_category=N | ||
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|nearest_promoter_id=NM_001367767 | |nearest_promoter_id=NM_001367767 | ||
|nearest_refseq=NM_001277335 | |nearest_refseq=NM_001277335 | ||
|nearest_transcripts=NM_001079877.2:-1 ENST00000522443.5:5 ENST00000522801.5:13 ENST00000462172.5:22 ENST00000521076.5:59 | |||
|nearest_unigene=Hs.530089 | |nearest_unigene=Hs.530089 | ||
|peak_score=1 | |peak_score=1 | ||
| Line 33: | Line 35: | ||
|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000262940.12 ENST00000449970.6 ENST00000523568.5 ENST00000521892.1 | |transcript_name=ENST00000262940.12 ENST00000449970.6 ENST00000523568.5 ENST00000521892.1 NM_006989.6 | ||
|tss_cluster_detected=2 | |tss_cluster_detected=2 | ||
|tss_id=rfhg_98016.1 | |tss_id=rfhg_98016.1 | ||
Revision as of 06:15, 13 November 2024
Basic information about the TSS
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| Source datasets | EPD|DRA000914 | |||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Protocol | TSS_database|CAGE | |||||||||||||
| TSS cluster detected* | 2 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001367767 |
| Entrez ID: | 100271927 |
| Nearest Unigene: | Hs.530089 |
| Nearest Refseq: | NM_001277335 |
| Nearest Ensembl: | ENSG00000170667 |
| Gene Name: | RASA4B |
| Gene Alias: | - |
| Gene Type: | protein-coding |
| CpG%: | 0.000000 |
| GC%: | 0.571429 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.