TSS: Rfhg 98178.1: Difference between revisions

Revision as of 06:17, 13 November 2024

Basic information about the TSS

TSS ID:	rfhg_98178.1
Species:	human
Chr:	chr7

Start:	105014218
End:	105014232
Strand:	-

Source datasets

ENCODE

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D4011914,EH38E2578331)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	NR_024586.1:77
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	ENST00000453677.1:-89 AK123476:135 BC017007:168 view more...

Gene_name:	KMT2E
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	20
Nearest PromoterID:	NM_182931
Entrez ID:	55904
Nearest Unigene:	Hs.592262
Nearest Refseq:	NM_018682
Nearest Ensembl:	ENSG00000005483
Gene Name:	KMT2E
Gene Alias:	HDCMC04P\|MLL5\|NKp44L
Gene Type:	protein-coding
CpG%:	0.071429
GC%:	0.666667
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 1: / Line 1: @@
 {{TSSDetailV4
+|all_trans=NR_024586.1:77 ENST00000453677.1:-89 AK123476:135 BC017007:168
 |annotation=promoter-TSS (NM_018682)
 |ccre_category=PLS
@@ Line 25: / Line 26: @@
 |nearest_promoter_id=NM_182931
 |nearest_refseq=NM_018682
+|nearest_transcripts=ENST00000453677.1:-89 AK123476:135 BC017007:168
 |nearest_unigene=Hs.592262
 |peak_score=1