TSS: Hg 102473.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.02 |distance_to_tss=4405 |entrez_id=3309 |gc_percent=0.442786 |gene_alias=BIP|GRP78|HEL-S-89n|MIF2 |gene_description=heat shock protein family A (Hs...") |
No edit summary |
||
Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|GRP78= | |||
|HEL-S-89n= | |||
|MIF2= | |||
|chr=chr9 | |||
|cpg_percent=0.02 | |cpg_percent=0.02 | ||
|distance= | |||
|distance_to_tss=4405 | |distance_to_tss=4405 | ||
|end=125237001 | |||
|entrez_id=3309 | |entrez_id=3309 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
Line 12: | Line 18: | ||
|nearest_refseq=NM_005347 | |nearest_refseq=NM_005347 | ||
|nearest_unigene=Hs.743241 | |nearest_unigene=Hs.743241 | ||
|num_trans=0 | |||
|species=human | |||
|start=125236962 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=no | |||
|tss_id=hg_102473.1 | |tss_id=hg_102473.1 | ||
|tss_score=1 | |||
}} | }} |
Revision as of 19:28, 8 March 2018
Basic information about the TSS
|
| |||||||||||||
TSS cluster detected* |
---|
* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
|
|
TATA-Box annotation
Distance to TSS: | 4405 |
---|---|
Nearest PromoterID: | NM_005347 |
Entrez ID: | 3309 |
Nearest Unigene: | Hs.743241 |
Nearest Refseq: | NM_005347 |
Nearest Ensembl: | ENSG00000044574 |
Gene Name: | HSPA5 |
Gene Alias: | BIP |
Gene Description: | heat shock protein family A (Hsp70) member 5 |
Gene Type: | protein-coding |
CpG%: | 0.02 |
GC%: | 0.442786 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |