TSS: Rfmm 60143.1: Difference between revisions
From referenceTSS
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{{TSSDetailV4 | {{TSSDetailV4 | ||
|all_trans=ENSMUST00000008011.8:0 ENSMUST00000162741.8:0 NR_168036.1:0 AK049916:0 AK162833:0 | |||
|annotation=promoter-TSS (NR_168036.1) | |annotation=promoter-TSS (NR_168036.1) | ||
|ccre_category=N | |ccre_category=N | ||
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|nearest_promoter_id=NR_168036.1 | |nearest_promoter_id=NR_168036.1 | ||
|nearest_refseq= | |nearest_refseq= | ||
|nearest_transcripts= | |||
|nearest_unigene=NR_168036 | |nearest_unigene=NR_168036 | ||
|peak_score=1 | |peak_score=1 | ||
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|strand=+ | |strand=+ | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENSMUST00000008011.8 ENSMUST00000162741.8 AK049916 AK162833 | |transcript_name=ENSMUST00000008011.8 ENSMUST00000162741.8 NR_168036.1 AK049916 AK162833 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfmm_60143.1 | |tss_id=rfmm_60143.1 | ||
Revision as of 16:49, 14 November 2024
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 5)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NR_168036.1 |
| Entrez ID: | Gm9946 |
| Nearest Unigene: | NR_168036 |
| Nearest Refseq: | |
| Nearest Ensembl: | |
| Gene Name: | Gm9946 |
| Gene Alias: | |
| Gene Type: | |
| CpG%: | 0.000000 |
| GC%: | 0.500000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.