TSS: Rfmm 71464.1: Difference between revisions

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{{TSSDetailV4
{{TSSDetailV4
|all_trans=ENSMUST00000057528.2:141 NM_147061.1:141 BC119417:141 BC119418:141 BC104116:149 BC104117:149
|annotation=promoter-TSS (NM_147061.1)
|annotation=promoter-TSS (NM_147061.1)
|ccre_category=N
|ccre_category=N
Line 25: Line 26:
|nearest_promoter_id=NM_147061.1
|nearest_promoter_id=NM_147061.1
|nearest_refseq=
|nearest_refseq=
|nearest_transcripts=BC104116:149 BC104117:149
|nearest_unigene=NM_147061
|nearest_unigene=NM_147061
|peak_score=1
|peak_score=1
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|strand=-
|strand=-
|tata_box=
|tata_box=
|transcript_name=ENSMUST00000057528.2 BC119417 BC119418
|transcript_name=ENSMUST00000057528.2 NM_147061.1 BC119417 BC119418
|tss_cluster_detected=1
|tss_cluster_detected=1
|tss_id=rfmm_71464.1
|tss_id=rfmm_71464.1

Revision as of 19:55, 14 November 2024

Basic information about the TSS


TSS ID:rfmm_71464.1
Species:mouse
Chr:chr7
Start:104987062
End:104987062
Strand:-
Source datasetsEPD
ProtocolTSS_database
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation


Description:-
Category:-

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:ENSMUST00000057528.2:141
NM_147061.1:141
BC119417:141
BC119418:141
GeneID:259063
HGNC/MGI_ID:MGI:3030525
UniProt_ID:Q8VGW5
Nearer transcript ids and distances:
  • BC104116:149
  • BC104117:149
view more...
Gene_name:Olfr691
Gene_symbol:Or52b2
Gene_synonyms:GA_x6K02T2PBJ9-7966695-7965727 MOR31-6 Olfr691
Gene_source:MGI:3030525



TATA-Box annotation


Distance to TSS:-141
Nearest PromoterID:NM_147061.1
Entrez ID:Olfr691
Nearest Unigene:NM_147061
Nearest Refseq:
Nearest Ensembl:
Gene Name:Olfr691
Gene Alias:
Gene Type:
CpG%:0.000000
GC%:0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



TSS expression

Expression data not found.