TSS: Rfmm 99338.1: Difference between revisions

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{{TSSDetailV4
{{TSSDetailV4
|all_trans=
|annotation=Intergenic
|annotation=Intergenic
|ccre_category=dELS
|ccre_category=dELS
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|nearest_promoter_id=Gm20091
|nearest_promoter_id=Gm20091
|nearest_refseq=
|nearest_refseq=
|nearest_transcripts=
|nearest_unigene=Gm20091
|nearest_unigene=Gm20091
|peak_score=1
|peak_score=1

Revision as of 03:32, 15 November 2024

Basic information about the TSS

TSS ID:rfmm_99338.1
Species:mouse
Chr:chr10
Start:96236919
End:96236930
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 5)


cCREs annotation

Description:dELS (EM10D1181945,EM10E0486283)
Category:dELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation

Nearest transcript id and distance:
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
    Gene_name:Gm20091
    Gene_symbol:
    Gene_synonyms:
    Gene_source:



    TATA-Box annotation

    Distance to TSS:8067
    Nearest PromoterID:Gm20091
    Entrez ID:Gm20091
    Nearest Unigene:Gm20091
    Nearest Refseq:
    Nearest Ensembl:
    Gene Name:Gm20091
    Gene Alias:
    Gene Type:NA
    CpG%:0.000000
    GC%:0.500000
    TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):



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