TSS: Rfhg 100796.1: Difference between revisions
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|gene_description=zinc finger CCCH-type containing, antiviral 1 like | |gene_description=zinc finger CCCH-type containing, antiviral 1 like | ||
|gene_id=92092 | |gene_id=92092 | ||
|gene_name= | |gene_name=zinc finger CCCH-type containing, antiviral 1 like | ||
|gene_source=HGNC:22423 | |gene_source=HGNC:22423 | ||
|gene_symbol=ZC3HAV1L | |gene_symbol=ZC3HAV1L | ||
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|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000275766.2 | |transcript_name=ENST00000275766.2 BC008842 | ||
|tss_cluster_detected=5 | |tss_cluster_detected=5 | ||
|tss_id=rfhg_100796.1 | |tss_id=rfhg_100796.1 | ||
Latest revision as of 11:22, 13 March 2025
Basic information about the TSS
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| Source datasets | PRJNA4843412|DRA013844|PRJNA548673|PRJNA615891 | |||||||||||||
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| Protocol | NETCAGE|CAGE|SLIC_CAGE|ReCappable-seq | |||||||||||||
| TSS cluster detected* | 5 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS,CTCF-bound (EH38D4038151,EH38E2595369) |
|---|---|
| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_080660 |
| Entrez ID: | 92092 |
| Nearest Unigene: | Hs.512833 |
| Nearest Refseq: | NM_080660 |
| Nearest Ensembl: | ENSG00000146858 |
| Gene Name: | zinc finger CCCH-type containing, antiviral 1 like |
| Gene Alias: | C7orf39 |
| Gene Type: | protein-coding |
| CpG%: | 0.169492 |
| GC%: | 0.850000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.