TSS: Rfhg 105486.1: Difference between revisions

Latest revision as of 12:47, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_105486.1
Species:	human
Chr:	chr8

Start:	31033295
End:	31033364
Strand:	-

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D4078738,EH38E2622436)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000523392.2:0
GeneID:	29942
HGNC/MGI_ID:	HGNC:17930
UniProt_ID:	K7ENC1
Nearer transcript ids and distances:	LF208074:-242 MA443651:-242 ENST00000339382.3:-351 ENST00000475541.2:-351 AY077841:-351 AF195513:-351 NM_013357.2:494 BC106708:494 view more...

Gene_name:	purine rich element binding protein G
Gene_symbol:	PURG
Gene_synonyms:	PURG-A PURG-B
Gene_source:	HGNC:17930

TATA-Box annotation

Distance to TSS:	27
Nearest PromoterID:	NM_001015508
Entrez ID:	29942
Nearest Unigene:	Hs.373778
Nearest Refseq:	NM_013357
Nearest Ensembl:	ENSG00000172733
Gene Name:	purine rich element binding protein G
Gene Alias:	PURG-A\|PURG-B\|PURGA\|PURGB
Gene Type:	protein-coding
CpG%:	0.115942
GC%:	0.771429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=purine rich element binding protein G
 |gene_id=29942
-|gene_name=PURG
+|gene_name=purine rich element binding protein G
 |gene_source=HGNC:17930
 |gene_symbol=PURG
@@ Line 35: / Line 35: @@
 |strand=-
 |tata_box=
-|transcript_name=ENST00000523392.2 NM_001015508.3 NM_001323312.2 NM_001323311.2
+|transcript_name=ENST00000523392.2
 |tss_cluster_detected=1
 |tss_id=rfhg_105486.1