TSS: Rfhg 115195.1: Difference between revisions

Latest revision as of 15:48, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_115195.1
Species:	human
Chr:	chr9

Start:	60914407
End:	60914407
Strand:	+

Source datasets

EPD

Protocol

TSS_database

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000437823.5:0
GeneID:	727905
HGNC/MGI_ID:	HGNC:32005
UniProt_ID:	Q5VU36
Nearer transcript ids and distances:

Gene_name:	SPATA31 subfamily A member 5
Gene_symbol:	SPATA31A5
Gene_synonyms:	OTTHUMG00000013204
Gene_source:	HGNC:32005

TATA-Box annotation

Distance to TSS:	0
Nearest PromoterID:	NM_001113541
Entrez ID:	727905
Nearest Unigene:	Hs.645497
Nearest Refseq:	NM_001113541
Nearest Ensembl:	ENSG00000276581
Gene Name:	SPATA31 subfamily A member 5
Gene Alias:	FAM75A5
Gene Type:	protein-coding
CpG%:	0.000000
GC%:	0.000000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=SPATA31 subfamily A member 5
 |gene_id=727905
-|gene_name=SPATA31A5
+|gene_name=SPATA31 subfamily A member 5
 |gene_source=HGNC:32005
 |gene_symbol=SPATA31A5
@@ Line 35: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000437823.5 NM_001113541.3
+|transcript_name=ENST00000437823.5
 |tss_cluster_detected=1
 |tss_id=rfhg_115195.1