TSS: Rfhg 117927.1: Difference between revisions

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|gene_description=PALM2-AKAP2 fusion
|gene_description=PALM2-AKAP2 fusion
|gene_id=
|gene_id=
|gene_name=PALM2-AKAP2
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 16:37, 13 March 2025

Basic information about the TSS


TSS ID:rfhg_117927.1
Species:human
Chr:chr9
Start:109772270
End:109772276
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D4225460,EH38E2716962)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:NR_171891.1:0
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000449258.1:227
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:-7925
Nearest PromoterID:NM_147150
Entrez ID:445815
Nearest Unigene:Hs.591908
Nearest Refseq:NM_007203
Nearest Ensembl:ENSG00000157654
Gene Name:
Gene Alias:AKAP-2|AKAP-KL|AKAP2|AKAPKL|MISP2|PALM2|PRKA2
Gene Type:protein-coding
CpG%:0.000000
GC%:0.571429
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):