TSS: Rfhg 124788.1: Difference between revisions

Latest revision as of 18:45, 13 March 2025

Basic information about the TSS

TSS ID:	rfhg_124788.1
Species:	human
Chr:	chr10

Start:	37125594
End:	37125605
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	-
Category:	-

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	ENST00000374660.7:0 ENST00000602533.7:0 ENST00000361713.2:0
GeneID:	91074
HGNC/MGI_ID:	HGNC:17234
UniProt_ID:	Q5W026 Q9BXX3 R4GNA2
Nearer transcript ids and distances:	AF269087:252 BC172447:351 view more...

Gene_name:	ankyrin repeat domain 30A
Gene_symbol:	ANKRD30A
Gene_synonyms:	NY-BR-1
Gene_source:	HGNC:17234

TATA-Box annotation

Distance to TSS:	-258
Nearest PromoterID:	NM_052997
Entrez ID:	91074
Nearest Unigene:	Hs.373787
Nearest Refseq:	NM_052997
Nearest Ensembl:	ENSG00000148513
Gene Name:	ankyrin repeat domain 30A
Gene Alias:	NY-BR-1
Gene Type:	protein-coding
CpG%:	0.090909
GC%:	0.583333
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

TSS expression

Expression data not found.

@@ Line 16: / Line 16: @@
 |gene_description=ankyrin repeat domain 30A
 |gene_id=91074
-|gene_name=ANKRD30A
+|gene_name=ankyrin repeat domain 30A
 |gene_source=HGNC:17234
 |gene_symbol=ANKRD30A
@@ Line 35: / Line 35: @@
 |strand=+
 |tata_box=
-|transcript_name=ENST00000374660.7 ENST00000602533.7 ENST00000361713.2 NM_052997.3
+|transcript_name=ENST00000374660.7 ENST00000602533.7 ENST00000361713.2
 |tss_cluster_detected=1
 |tss_id=rfhg_124788.1