TSS: Rfhg 12710.1: Difference between revisions
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|gene_description=cornulin | |gene_description=cornulin | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name=high mobility group nucleosomal binding domain 3 pseudogene 1 | ||
|gene_source=HGNC:39206 | |gene_source=HGNC:39206 | ||
|gene_symbol=HMGN3P1 | |gene_symbol=HMGN3P1 | ||
Latest revision as of 19:27, 13 March 2025
Basic information about the TSS
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| Source datasets | PRJDB5282|PRJNA615891 | |||||||||||||
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| Protocol | C1CAGE|SLIC_CAGE|TIF-seq2 | |||||||||||||
| TSS cluster detected* | 3 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | CTCF-only,CTCF-bound (EH38D2222954,EH38E1384984) |
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| Category: | CTCF-only |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 14780 |
|---|---|
| Nearest PromoterID: | NM_016190 |
| Entrez ID: | 49860 |
| Nearest Unigene: | Hs.242057 |
| Nearest Refseq: | NM_016190 |
| Nearest Ensembl: | ENSG00000143536 |
| Gene Name: | high mobility group nucleosomal binding domain 3 pseudogene 1 |
| Gene Alias: | C1orf10|DRC1|PDRC1|SEP53 |
| Gene Type: | protein-coding |
| CpG%: | 0.062500 |
| GC%: | 0.636364 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.