TSS: Rfhg 129074.1: Difference between revisions

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|gene_description=NK2 homeobox 3
|gene_description=NK2 homeobox 3
|gene_id=
|gene_id=
|gene_name=NKX2-3
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 20:02, 13 March 2025

Basic information about the TSS


TSS ID:rfhg_129074.1
Species:human
Chr:chr10
Start:99533165
End:99533174
Strand:+
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2381483,EH38E1492922)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:KJ903917:-33
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • AK300856:-184
  • AK313485:-204
  • ENST00000622383.1:-212
  • BC025788:-212
  • ENST00000344586.9:-223
  • NM_145285.3:-223
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:227
Nearest PromoterID:NM_145285
Entrez ID:159296
Nearest Unigene:Hs.243272
Nearest Refseq:NM_145285
Nearest Ensembl:ENSG00000119919
Gene Name:
Gene Alias:CSX3|NK2.3|NKX2.3|NKX2C|NKX4-3
Gene Type:protein-coding
CpG%:0.000000
GC%:0.400000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):