TSS: Rfhg 153382.1: Difference between revisions

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|gene_description=leucine rich repeat containing 10
|gene_description=leucine rich repeat containing 10
|gene_id=
|gene_id=
|gene_name=LRRC10
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 03:55, 14 March 2025

Basic information about the TSS


TSS ID:rfhg_153382.1
Species:human
Chr:chr12
Start:69610843
End:69610867
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS,CTCF-bound (EH38D2574535,EH38E1623091)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:KJ896157:4
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • ENST00000361484.5:-40
  • NM_201550.4:-40
  • AK123908:85
  • BC106893:85
  • KJ904244:86
  • BC106892:88
  • BC090881:-295
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:52
Nearest PromoterID:NM_201550
Entrez ID:376132
Nearest Unigene:Hs.448708
Nearest Refseq:NM_201550
Nearest Ensembl:ENSG00000198812
Gene Name:
Gene Alias:HRLRRP|LRRC10A
Gene Type:protein-coding
CpG%:0.041667
GC%:0.760000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):