TSS:Rfhg 154445.1

Basic information about the TSS

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TSS ID: rfhg_154445.1 TSS ID(Version3): hg_132463.1 Species: human Chr: chr12		Start: 89525899 End: 89525920 Strand: -
Source datasets	FANTOM5|PRJNA4843412|DRA013844|PRJDB5282
Protocol	CAGE|NETCAGE|C1CAGE
TSS cluster detected*	4

  * The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

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Description:	PLS,CTCF-bound (EH38D2588171,EH38E1630958)
Category:	PLS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

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Nearest transcript id and distance: HQ447314:4 KJ895949:4 CU693124:4 GeneID: HGNC/MGI_ID: UniProt_ID: Nearer transcript ids and distances: ENST00000539190.6:-73 ENST00000548715.5:-77 BX647258:-78 ENST00000547496.5:-80 ENST00000546830.1:-80 AK074772:-80 AK295596:-80 ENST00000547274.5:-100 BC026080:-104 EF011619:-104 ENST00000313546.8:-127 NM_172240.3:-127 NR_037659.2:-127 NM_001199781.2:-127 ENST00000548729.5:-278 ENST00000393179.8:284 ENST00000549035.1:336 AK123106:336 ENST00000547474.1:-342 NM_001199782.1:-342 AK297677:-342 NM_001199777.2:469 NR_037660.2:469 ENST00000552563.1:484 view more...

Gene_name: Gene_symbol: Gene_synonyms: Gene_source:

TATA-Box annotation

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Distance to TSS:	138
Nearest PromoterID:	NM_172240
Entrez ID:	282809
Nearest Unigene:	Hs.25130
Nearest Refseq:	NM_172240
Nearest Ensembl:	ENSG00000139323
Gene Name:
Gene Alias:	CORD20|PIX1|TUWD12|WDR51B
Gene Type:	protein-coding
CpG%:	0.047619
GC%:	0.727273
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

Property "Nearest transcripts" (as page type) with input value "ENST00000539190.6:-73 ENST00000548715.5:-77 BX647258:-78 ENST00000547496.5:-80 ENST00000546830.1:-80 AK074772:-80 AK295596:-80 ENST00000547274.5:-100 BC026080:-104 EF011619:-104 ENST00000313546.8:-127 NM_172240.3:-127 NR_037659.2:-127 NM_001199781.2:-127 ENST00000548729.5:-278 ENST00000393179.8:284 ENST00000549035.1:336 AK123106:336 ENST00000547474.1:-342 NM_001199782.1:-342 AK297677:-342 NM_001199777.2:469 NR_037660.2:469 ENST00000552563.1:484" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.