TSS: Rfhg 161646.1: Difference between revisions
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|gene_description=long intergenic non-protein coding RNA 564 | |gene_description=long intergenic non-protein coding RNA 564 | ||
|gene_id=100861546 | |gene_id=100861546 | ||
|gene_name= | |gene_name=long intergenic non-protein coding RNA 564 | ||
|gene_source=HGNC:43708 | |gene_source=HGNC:43708 | ||
|gene_symbol=LINC00564 | |gene_symbol=LINC00564 | ||
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|strand=- | |strand=- | ||
|tata_box= | |tata_box= | ||
|transcript_name=ENST00000567258 | |transcript_name=ENST00000567258.1 BC039360 | ||
|tss_cluster_detected=1 | |tss_cluster_detected=1 | ||
|tss_id=rfhg_161646.1 | |tss_id=rfhg_161646.1 | ||
Latest revision as of 06:31, 14 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | - |
|---|---|
| Category: | - |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NR_047494 |
| Entrez ID: | 100861546 |
| Nearest Unigene: | Hs.539621 |
| Nearest Refseq: | NR_047494 |
| Nearest Ensembl: | ENSG00000260094 |
| Gene Name: | long intergenic non-protein coding RNA 564 |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.166667 |
| GC%: | 0.857143 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
TSS expression
Expression data not found.