TSS: Rfhg 163265.1: Difference between revisions

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|gene_description=apurinic/apyrimidinic endodeoxyribonuclease 1
|gene_description=apurinic/apyrimidinic endodeoxyribonuclease 1
|gene_id=
|gene_id=
|gene_name=APEX1
|gene_name=
|gene_source=
|gene_source=
|gene_symbol=
|gene_symbol=

Latest revision as of 07:00, 14 March 2025

Basic information about the TSS


TSS ID:rfhg_163265.1
Species:human
Chr:chr14
Start:20455965
End:20455985
Strand:-
Source datasetsFANTOM5
ProtocolCAGE
TSS cluster detected*1

  * The number of TSS cluster called data-sets (maximum 17)


cCREs annotation


Description:pELS (EH38D2697590,EH38E1700985)
Category:pELS

  * cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.



Gene and protein annotation


Nearest transcript id and distance:LF334339:-23
MA569916:-23
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:
  • LY501237:151
  • MA780125:151
  • LF334338:343
  • MA569915:343
  • LF334340:-419
  • MA569917:-419
view more...
Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:



TATA-Box annotation


Distance to TSS:749
Nearest PromoterID:NM_001641
Entrez ID:328
Nearest Unigene:Hs.73722
Nearest Refseq:NM_001641
Nearest Ensembl:ENSG00000100823
Gene Name:
Gene Alias:APE|APE1|APEN|APEX|APX|HAP1|REF1
Gene Type:protein-coding
CpG%:0.000000
GC%:0.761905
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):