TSS: Rfhg 163775.1: Difference between revisions
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|gene_description=uncharacterized LOC105370401 | |gene_description=uncharacterized LOC105370401 | ||
|gene_id= | |gene_id= | ||
|gene_name= | |gene_name= | ||
|gene_source= | |gene_source= | ||
|gene_symbol= | |gene_symbol= | ||
Latest revision as of 07:10, 14 March 2025
Basic information about the TSS
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| Source datasets | FANTOM5 | |||||||||||||
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| Protocol | CAGE | |||||||||||||
| TSS cluster detected* | 1 | |||||||||||||
* The number of TSS cluster called data-sets (maximum 17)
cCREs annotation
| Description: | PLS (EH38D2699020,EH38E1702049) |
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| Category: | PLS |
* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 151694 |
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| Nearest PromoterID: | NR_148363 |
| Entrez ID: | 105370401 |
| Nearest Unigene: | Hs.435144 |
| Nearest Refseq: | NR_148361 |
| Nearest Ensembl: | |
| Gene Name: | |
| Gene Alias: | - |
| Gene Type: | ncRNA |
| CpG%: | 0.000000 |
| GC%: | 0.400000 |
| TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation): |
Property "Nearest transcripts" (as page type) with input value "MA873693:34 LY596105:34 AB976903:39 AB976722:40 AB976945:40 AB977051:40 AB976970:40 AB977096:40 ENST00000390465.2:41 AB305773:41 AB305734:41 AB305727:41 AB305672:41 BC070337:41 AB305777:42 AB749824:42 AB976742:42 AB977310:42 AB977268:45 AB306025:46 AB749922:46 Z29614:46 AB976927:46 AB749826:47 AB306087:53 MA873694:53 LY596106:53 AB306102:54 MA873695:54 LY596107:54 AB306009:65 MA873698:68 LY596110:68 MA873699:78 LY596111:78 AB306023:80 M27375:87 AY360462:87 AY375451:87 EU427376:87 FJ795365:87 L34703:87 MN782533:87 AB977345:110 AB977376:163 AB306100:166 MA873706:374 LY596118:374 Z29579:392 Y15199:464 GQ502856:476 GQ502833:476" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.