TSS: Rfhg 164096.1: Difference between revisions

Latest revision as of 07:15, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_164096.1
Species:	human
Chr:	chr14

Start:	23095201
End:	23095223
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	PLS,CTCF-bound (EH38D2699904,EH38E1702830)
Category:	PLS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	LF334521:16 MA570098:16
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	LF334520:-178 MA570097:-178 LF334522:223 MA570099:223 ENST00000319074.6:282 NM_017924.4:282 AF061731:282 BC056255:284 ENST00000554203.1:302 BC061637:316 AK000678:327 BC009645:356 AK024794:-481 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	-293
Nearest PromoterID:	NM_017924
Entrez ID:	55017
Nearest Unigene:	Hs.525238
Nearest Refseq:	NM_017924
Nearest Ensembl:	ENSG00000179933
Gene Name:
Gene Alias:	-
Gene Type:	protein-coding
CpG%:	0.045455
GC%:	0.652174
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 16: / Line 16: @@
 |gene_description=chromosome 14 open reading frame 119
 |gene_id=
-|gene_name=C14orf119
+|gene_name=
 |gene_source=
 |gene_symbol=