TSS: Hg 102680.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.125 |distance_to_tss=-837 |entrez_id=25792 |gc_percent=0.686567 |gene_alias=LSFR1|NP94|ZNF356 |gene_description=CDKN1A interacting zinc finger prote...") |
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{{TSSDetail | {{TSSDetail | ||
|NP94= | |||
|ZNF356= | |||
|chr=chr9 | |||
|cpg_percent=0.125 | |cpg_percent=0.125 | ||
|distance= | |||
|distance_to_tss=-837 | |distance_to_tss=-837 | ||
|end=128192954 | |||
|entrez_id=25792 | |entrez_id=25792 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
| Line 12: | Line 17: | ||
|nearest_refseq=NM_012127 | |nearest_refseq=NM_012127 | ||
|nearest_unigene=Hs.212395 | |nearest_unigene=Hs.212395 | ||
|num_trans=0 | |||
|species=human | |||
|start=128192927 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_102680.1 | |tss_id=hg_102680.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:36, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -837 |
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| Nearest PromoterID: | NM_001257975 |
| Entrez ID: | 25792 |
| Nearest Unigene: | Hs.212395 |
| Nearest Refseq: | NM_012127 |
| Nearest Ensembl: | ENSG00000148337 |
| Gene Name: | CIZ1 |
| Gene Alias: | LSFR1 |
| Gene Description: | CDKN1A interacting zinc finger protein 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.125 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |