TSS: Hg 10269.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=90266 |entrez_id=54897 |gc_percent=0.577114 |gene_alias=CAS11|CST|SRG|ZNF693|dJ734G22.1 |gene_description=castor zinc finger 1...") |
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{{TSSDetail | {{TSSDetail | ||
|CST= | |||
|SRG= | |||
|ZNF693= | |||
|chr=chr1 | |||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|dJ734G22.1= | |||
|distance= | |||
|distance_to_tss=90266 | |distance_to_tss=90266 | ||
|end=10706415 | |||
|entrez_id=54897 | |entrez_id=54897 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| Line 12: | Line 19: | ||
|nearest_refseq=NM_017766 | |nearest_refseq=NM_017766 | ||
|nearest_unigene=Hs.439894 | |nearest_unigene=Hs.439894 | ||
|num_trans=0 | |||
|species=human | |||
|start=10706404 | |||
|strand=- | |||
|transcript_name= | |||
|tss_classification=yes | |||
|tss_id=hg_10269.1 | |tss_id=hg_10269.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | 90266 |
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| Nearest PromoterID: | NM_001079843 |
| Entrez ID: | 54897 |
| Nearest Unigene: | Hs.439894 |
| Nearest Refseq: | NM_017766 |
| Nearest Ensembl: | ENSG00000130940 |
| Gene Name: | CASZ1 |
| Gene Alias: | CAS11 |
| Gene Description: | castor zinc finger 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |