TSS: Rfhg 174484.1: Difference between revisions

Latest revision as of 10:28, 14 March 2025

Basic information about the TSS

TSS ID:	rfhg_174484.1
Species:	human
Chr:	chr15

Start:	56919804
End:	56919817
Strand:	+

Source datasets

FANTOM5

Protocol

CAGE

TSS cluster detected^*

1

* The number of TSS cluster called data-sets (maximum 17)

cCREs annotation

Description:	pELS,CTCF-bound (EH38D2792140,EH38E1764317)
Category:	pELS

* cCREs are candidates for cis regulatory elements generated from the subset of representative DNase hypersensitivity sites supported by either histone modifications or CTCF-binding data. Find more details here.

Gene and protein annotation

Nearest transcript id and distance:	KJ897643:94
GeneID:
HGNC/MGI_ID:
UniProt_ID:
Nearer transcript ids and distances:	CU690724:97 AB384761:97 AM393720:97 EU446662:97 EU832502:97 EU832583:97 AF289510:159 ENST00000561152.1:-287 NM_001322165.2:-359 NM_001322164.2:-359 view more...

Gene_name:
Gene_symbol:
Gene_synonyms:
Gene_source:

TATA-Box annotation

Distance to TSS:	365
Nearest PromoterID:	NM_001322164
Entrez ID:	6938
Nearest Unigene:	Hs.511504
Nearest Refseq:	NM_003205
Nearest Ensembl:	ENSG00000140262
Gene Name:
Gene Alias:	CRS3\|HEB\|HTF4\|HsT17266\|TCF-12\|bHLHb20\|p64
Gene Type:	protein-coding
CpG%:	0.076923
GC%:	0.500000
TATA-Box(TBP)/Promoter/Homer Distance From Peak(sequence,strand,conservation):

@@ Line 16: / Line 16: @@
 |gene_description=transcription factor 12
 |gene_id=
-|gene_name=TCF12
+|gene_name=
 |gene_source=
 |gene_symbol=