TSS: Hg 102693.1: Difference between revisions
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.15 |distance_to_tss=-152 |entrez_id=6709 |gc_percent=0.776119 |gene_alias=EIEE5|NEAS|SPTA2 |gene_description="spectrin alpha, non-erythrocytic 1" |g...") |
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{{TSSDetail | {{TSSDetail | ||
|NEAS= | |||
|SPTA2= | |||
|all_trans=ENST00000434999.1:0 uc064wez.1:0 | |||
|chr=chr9 | |||
|cpg_percent=0.15 | |cpg_percent=0.15 | ||
|distance=0 | |||
|distance_to_tss=-152 | |distance_to_tss=-152 | ||
|end=128552423 | |||
|entrez_id=6709 | |entrez_id=6709 | ||
|gc_percent=0.776119 | |gc_percent=0.776119 | ||
| Line 12: | Line 18: | ||
|nearest_refseq=NM_003127 | |nearest_refseq=NM_003127 | ||
|nearest_unigene=Hs.372331 | |nearest_unigene=Hs.372331 | ||
|num_trans=2 | |||
|species=human | |||
|start=128552388 | |||
|strand=- | |||
|transcript_name=ENST00000434999.1 uc064wez.1 | |||
|tss_classification=yes | |||
|tss_id=hg_102693.1 | |tss_id=hg_102693.1 | ||
|tss_score=1 | |||
}} | }} | ||
Revision as of 19:37, 8 March 2018
Basic information about the TSS
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| TSS cluster detected* |
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* The number of TSS cluster called studies (maximum 16)
Gene and protein annotation
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TATA-Box annotation
| Distance to TSS: | -152 |
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| Nearest PromoterID: | NM_001130438 |
| Entrez ID: | 6709 |
| Nearest Unigene: | Hs.372331 |
| Nearest Refseq: | NM_003127 |
| Nearest Ensembl: | ENSG00000197694 |
| Gene Name: | SPTAN1 |
| Gene Alias: | EIEE5 |
| Gene Description: | "spectrin alpha, non-erythrocytic 1" |
| Gene Type: | protein-coding |
| CpG%: | 0.15 |
| GC%: | 0.776119 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |